| MD Anaesthesiology | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD Anaesthesiology | Manipur — JNIMS · JNIMS-Direct | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD Anaesthesiology | Manipur — JNIMS · JNIMS-Inservice | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD Anatomy | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD Anatomy | Manipur — JNIMS · JNIMS-IP | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD Bio-Chemistry | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD Bio-Chemistry | Manipur — JNIMS · JNIMS-IP | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD Bio-Chemistry | Manipur — JNIMS · JNIMS-Inservice | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD Dermatology, Venereology & Leprosy | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD Dermatology, Venereology & Leprosy | Manipur — JNIMS · JNIMS-Direct | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD Forensic Medicine | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD Forensic Medicine | Manipur — JNIMS · JNIMS-Direct | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD Forensic Medicine | Manipur — JNIMS · JNIMS-Inservice | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD General Medicine | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD General Medicine | Manipur — JNIMS · JNIMS-Direct | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD General Medicine | Manipur — JNIMS · JNIMS-IP | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD General Medicine | Manipur — JNIMS · JNIMS-Inservice | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD Microbiology | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD Microbiology | Manipur — JNIMS · JNIMS-Direct | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD Paediatrics | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD Paediatrics | Manipur — JNIMS · JNIMS-Direct | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD Pathology | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD Pathology | Manipur — JNIMS · JNIMS-Direct | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD Pathology | Manipur — JNIMS · JNIMS-Inservice | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD Pharmacology | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD Pharmacology | Manipur — JNIMS · JNIMS-Direct | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD Physiology | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD Physiology | Manipur — JNIMS · JNIMS-IP | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD Physiology | Manipur — JNIMS · JNIMS-Direct | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MD Psychiatry | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD Psychiatry | Manipur — JNIMS · JNIMS-Inservice | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD Radio Diagnosis | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD Radio Diagnosis | Manipur — JNIMS · JNIMS-Direct | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD Radio Diagnosis | Manipur — JNIMS · JNIMS-Inservice | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD Radio Diagnosis | Manipur — JNIMS · JNIMS-Spons (JNIMS) | - | - | - | - |
| MD Social & Preventive Medicine | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD Social & Preventive Medicine | Manipur — JNIMS · JNIMS-Direct | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD Social & Preventive Medicine | Manipur — JNIMS · JNIMS-Inservice | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD Tuberculosis & Respiratory Diseases | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MD Tuberculosis & Respiratory Diseases | Manipur — JNIMS · JNIMS-Inservice | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MS ENT | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MS ENT | Manipur — JNIMS · JNIMS-Direct | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MS ENT | Manipur — JNIMS · JNIMS-Inservice | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MS General Surgery | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MS General Surgery | Manipur — JNIMS · JNIMS-Direct | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MS General Surgery | Manipur — JNIMS · JNIMS-Inservice | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MS General Surgery | Manipur — JNIMS · JNIMS-IP | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MS Obstetrics & Gynaecology | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MS Obstetrics & Gynaecology | Manipur — JNIMS · JNIMS-Direct | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MS Obstetrics & Gynaecology | Manipur — JNIMS · JNIMS-Inservice | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MS Obstetrics & Gynaecology | Manipur — JNIMS · JNIMS-Spons (JNIMS) | - | - | - | - |
| MS Ophthalmology | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MS Ophthalmology | Manipur — JNIMS · JNIMS-Inservice | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MS Ophthalmology | Manipur — JNIMS · JNIMS-Direct | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MS Orthopaedics | All India Counselling (MCC) — AIQ, Deemed & Central quotas · AIQ | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MS Orthopaedics | Manipur — JNIMS · JNIMS-IP | ₹50,000* | ₹50,000 | 0* | ₹0* |
| MS Orthopaedics | Manipur — JNIMS · JNIMS-Inservice | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |
| MS Orthopaedics | Manipur — JNIMS · JNIMS-Direct | ₹50,000* | ₹50,000 | 1* | ₹20,00,000* |